1IPJ

CRYSTAL STRUCTURES OF RECOMBINANT AND NATIVE SOYBEAN BETA-CONGLYCININ BETA HOMOTRIMERS COMPLEXES WITH N-ACETYL-D-GLUCOSAMINE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1IPJ

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 144560.00

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-CONGLYCININ, BETA CHAIN A, B, C 416 Glycine max Mutation: F14L, V29G, F175L
Gene Name(s): CG-4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B, C N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.202
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 82.78 α = 90.00
b = 69.47 β = 97.22
c = 125.33 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-05-16
  • Released Date: 2002-05-16
  • Deposition author(s): Maruyama, N., Adachi, M., Takahashi, K., Yagasaki, K., Kohno, M., Takenaka, Y., Okuda, E., Nakagawa, S., Mikami, B., Utsumi, S.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Non-polymer description, Version format compliance