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An Information Portal to 108263 Biological Macromolecular Structures

COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH ATORVASTATIN
Biology and Chemistry Report
1HWK
  •   Structure Details   Hide

    Structure Keywords

    Keywords oxidoreductase
    Text protein-inhibitor complex, oxidoreductase

    Polymeric Molecules

    Chain A,B,C,D
    Description HMG-COA REDUCTASE 
    Fragment CATALYTIC PORTION 
    Mutation M485I 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 50021.9 
    Source Method genetically manipulated  
    Entity Name 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE, HYDROXYMETHYLGLUTARYL-COA REDUCTASE 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    117  7-[2-(4-FLUORO-PHENYL)-5-ISOPROPYL-3-PHENYL-4-PHENYLCARBAMOYL-PYRROL-1-YL]- 3,5-DIHYDROXY-HEPTANOIC ACID  C33 H35 F N2 O5   558.64  View 
    ADP  ADENOSINE-5'-DIPHOSPHATE  C10 H15 N5 O10 P2   427.20  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D HMDH_HUMAN B7Z3Y9     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    A B C D  1.1.1.34        
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    8299   Isoprenoid Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Any Isoprenoid Compound Isoprene (2 Methylbuta 1 3 Diene) or Compounds Containing or Derived From Linked Isoprene (3 Methyl 2 Butenylene) Residues. 
    15936   Coenzyme a Metabolic Process  The Chemical Reactions and Pathways Involving Coenzyme a 3' Phosphoadenosine (5')diphospho(4')pantatheine an Acyl Carrier in Many Acylation and Acyl Transfer Reactions in Which the Intermediate Is a Thiol Ester. 
    55114   Oxidation Reduction Process  A Metabolic Process That Results in the Removal or Addition of One or More Electrons to or From a Substance with or Without the Concomitant Removal or Addition of a Proton or Protons. 
    5789   Endoplasmic Reticulum Membrane  The Lipid Bilayer Surrounding the Endoplasmic Reticulum. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    4420   Hydroxymethylglutaryl Coa Reductase (nadph) Activity  Catalysis of the Reaction: (r) Mevalonate + Coa + 2 Nadp(+) = (s) 3 Hydroxy 3 Methylglutaryl Coa + 2 H(+) + 2 Nadph. 
    16616   Oxidoreductase Activity Acting On the Ch Oh Group of Donors NAD or Nadp As Acceptor  Catalysis of an Oxidation Reduction (redox) Reaction in Which a Ch Oh Group Acts As a Hydrogen or Electron Donor and Reduces Nad+ or Nadp. 
    50661   Nadp Binding  Interacting Selectively and Non Covalently with Nicotinamide Adenine Dinucleotide Phosphate a Coenzyme Involved in Many Redox and Biosynthetic Reactions; Binding May Be to Either the Oxidized Form Nadp+ or the Reduced Form Nadph. 
    50662   Coenzyme Binding  Interacting Selectively and Non Covalently with a Coenzyme Any of Various Nonprotein Organic Cofactors That Are Required in Addition to an Enzyme and a Substrate For an Enzymatic Reaction to Proceed. 


    Protein Analyses

    Measured Binding Affinities   

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Gene hmgcr
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Dh5alpha
    Host Vector Type Plasmid
    Host Plasmid Name PGEX-CS


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    5 5q13.3-q14 3156     3-hydroxy-3-methylglutaryl-CoA reductase HMGCR    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs193026499 LS-SNP   dbSNP   A 595 R - > C Beta Ladder 6% (Buried) 5 74651250
    rs5908 LS-SNP   dbSNP   A 638 I - > V Beta Ladder 4% (Buried) 5 74652199
    rs147818666 LS-SNP   dbSNP   A 663 G - > A Helix 0% (Buried) 5 74654483
    rs200606736 LS-SNP   dbSNP   A 673 E - > Q Helix 64% (Exposed) 5 74654512
    rs201093294 LS-SNP   dbSNP   A 757 V - > I Helix 0% (Buried) 5 74655106