NAG
Query on NAG
|
A
|
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
GCU
Query on GCU
|
A
|
D-GLUCURONIC ACID
C6 H10 O7
AEMOLEFTQBMNLQ-WAXACMCWSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
BDP
Query on BDP
|
A
|
BETA-D-GLUCOPYRANURONIC ACID
D-GLUCURONIC ACID (Synonym)
C6 H10 O7
AEMOLEFTQBMNLQ-QIUUJYRFSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
MAN
Query on MAN
|
A
|
ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
MXY
Query on MXY
|
A
|
2-O-METHYL FUCOSE
C7 H14 O5
YLAMTMNJXPWCQN-XUVCUMPTSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
RAM
Query on RAM
|
A
|
ALPHA-L-RHAMNOSE
C6 H12 O5
SHZGCJCMOBCMKK-HGVZOGFYSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
XYP
Query on XYP
|
A
|
BETA-D-XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-KKQCNMDGSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|
CA
Query on CA
|
A
|
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
|
Help
Black dashed lines indicate hydrogen bonds, salt bridges, and metal interactions. Green solid line show hydrophobic interactions and green dashed lines show π-π and π-cation interactions.
Source Information
Interactions are determined by geometric criteria as described in K. Stierand, M. Rarey (2010),
Drawing the PDB: Protein-ligand complexes in two dimensions, ACS Med. Chem. Lett., DOI:
10.1021/ml100164p.
Ions and some metal complexes are excluded, as well as cases where no
interaction profile could be generated. Poseview diagrams can be calculated
for approximately 92% of the remaining complexes in the PDB.
PoseView
is developed at the
Center for Bioinformatics Hamburg
and jointly provided with
BioSolveIT
as a community service at the PDB.
A stand-alone version is provided by BioSolveIT.
|
Ligand Explorer
NGL
Binding Pocket (JSmol)
Electron Density (JSmol)
|