1HHQ

Role of active site resiude Lys16 in Nucleoside Diphosphate Kinase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 1HHQ

Classification: TRANSFERASE

Total Structure Weight: 16854.44

Macromolecule Entities
Molecule Chains Length Organism Details
NUCLEOSIDE DIPHOSPHATE KINASE A 155 Dictyostelium discoideum EC#: 2.7.4.6 IUBMB
Mutation: K16A
Details: AMMOUNIUM SULFATE
Gene Name(s): ndkC-1 gip17 ndkB DDB_G0273069 ndkC-2 DDB_G0273805
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.177
  • Space Group: P 63 2 2

Unit Cell:

Length (Å) Angle (°)
a = 72.15 α = 90.00
b = 72.15 β = 90.00
c = 107.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-12-26
  • Released Date: 2001-05-31
  • Deposition author(s): Schneider, B., Babolat, M., Xu, Y.W., Janin, J., Veron, M., Deville-Bonne, D.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance