1GVQ

STRUCTURE OF PENTAERYTHRITOL TETRANITRATE REDUCTASE AND COMPLEXED WITH 2-CYCLOHEXENONE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1GVQ

Classification: FLAVOENZYME

Total Structure Weight: 39956.47

Macromolecule Entities
Molecule Chains Length Organism Details
PENTAERYTHRITOL TETRANITRATE REDUCTASE A 364 Enterobacter cloacae Details: 2-CYCLOHEXENONE IS BOUND IN THE ACTIVE SITE
Gene Name(s): onr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
A2Q
Query on A2Q

A cyclohex-2-en-1-one
cyclohex-2-enone (Synonym)
C6 H8 O
FWFSEYBSWVRWGL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.65 α = 90.00
b = 68.44 β = 90.00
c = 89.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-26
  • Released Date: 2003-02-20
  • Deposition author(s): Barna, T., Moody, P.C.E.

Revision History

  • Version 1_0: 2003-02-20

    Type: Initial release

  • Version 1_1: 2012-04-25

    Type: Derived calculations, Other, Structure summary

  • Version 1_2: 2013-04-24

    Type: Database references, Derived calculations, Non-polymer description, Other, Refinement description, Structure summary, Version format compliance

  • Version 1_3: 2017-03-22

    Type: Atomic model, Non-polymer description, Structure summary