1GVO

STRUCTURE OF PENTAERYTHRITOL TETRANITRATE REDUCTASE AND COMPLEXED WITH 2,4 DINITROPHENOL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.38 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.175

Literature

Macromolecules
Sequence Display for 1GVO

Classification: OXIDOREDUCTASE

Total Structure Weight: 40044.45

Macromolecule Entities
Molecule Chains Length Organism Details
PENTAERYTHRITOL TETRANITRATE REDUCTASE A 364 Enterobacter cloacae Details: 2,4 DINITROPHENOL IS BOUND IN THE ACTIVE SITE
Gene Name(s): onr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DNF
Query on DNF

A 2,4-DINITROPHENOL
C6 H4 N2 O5
UFBJCMHMOXMLKC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.38 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.175
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.96 α = 90.00
b = 69.09 β = 90.00
c = 89.02 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-22
  • Released Date: 2003-02-20
  • Deposition author(s): Barna, T., Moody, P.C.E.

Revision History

  • Version 1_0: 2003-02-20

    Type: Initial release

  • Version 1_1: 2012-04-25

    Type: Derived calculations, Non-polymer description, Other, Structure summary

  • Version 1_2: 2013-05-01

    Type: Database references, Derived calculations, Other, Refinement description, Structure summary, Version format compliance