1GJN

Hydrogen Peroxide Derived Myoglobin Compound II at pH 5.2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.178

Literature

Macromolecules
Sequence Display for 1GJN

Classification: OXYGEN TRANSPORT

Total Structure Weight: 17809.13

Macromolecule Entities
Molecule Chains Length Organism Details
MYOGLOBIN A 153 Equus caballus Details: A FE(III)-BONDED HYDROXYL RADICAL
Gene Name(s): MB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OH
Query on OH

A HYDROXIDE ION
H O
XLYOFNOQVPJJNP-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.178
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 62.86 α = 90.00
b = 28.65 β = 105.93
c = 35.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-27
  • Released Date: 2002-03-01
  • Deposition author(s): Hersleth, H.-P., Dalhus, B., Gorbitz, C.H., Andersson, K.K.

Revision History

  • 2011-05-08
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance