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CRYSTAL STRUCTURE OF A SITE-SPECIFIC RECOMBINASE, GAMMA-DELTA RESOLVASE COMPLEXED WITH A 34 BP CLEAVAGE SITE
Biology and Chemistry Report
1GDT
  •   Structure Details   Hide

    Structure Keywords

    Keywords DNA BINDING PROTEIN/DNA
    Text PROTEIN-DNA COMPLEX, DOUBLE HELIX, OVERHANGING BASE, DNA BINDING PROTEIN-DNA COMPLEX

    Polymeric Molecules

    Chain C
    Description SITE I OF RES DNA 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6774.5 
    Source Method synthetic  
    Entity Name CROSSOVER SITE OR CLEAVAGE SITE 
    Chain D,F
    Description SITE I OF RES DNA 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3966.6 
    Source Method synthetic  
    Entity Name CROSSOVER SITE OR CLEAVAGE SITE 
    Chain E
    Description SITE I OF RES DNA 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 6445.3 
    Source Method synthetic  
    Entity Name CROSSOVER SITE OR CLEAVAGE SITE 
    Chain A,B
    Description PROTEIN (GAMMA DELTA RESOLVASE) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 20394.6 
    Source Method genetically manipulated  
    Entity Name GD RESOLVASE 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B TNR1_ECOLI P03012     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6310   DNA Recombination  Any Process in Which a New Genotype Is Formed by Reassortment of Genes Resulting in Gene Combinations Different From Those That Were Present in the Parents. in Eukaryotes Genetic Recombination Can Occur by Chromosome Assortment Intrachromosomal Recombination or Nonreciprocal Interchromosomal Recombination. Intrachromosomal Recombination Occurs by Crossing Over. in Bacteria It May Occur by Genetic Transformation Conjugation Transduction or F Duction. 
    15074   DNA Integration  The Process in Which a Segment of DNA Is Incorporated Into Another Usually Larger DNA Molecule Such As a Chromosome. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Escherichia coli  
    Genus Escherichia
    Strain STRAINS THAT CONTAIN F EPISOME
    Gene tnpr
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Ar120
    Host Gene Tnpr
    Host Plasmid Name MGH285


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 1263577     tnpR TNPR