1G12

ZINC PEPTIDASE FROM GRIFOLA FRONDOSA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 1G12

Classification: HYDROLASE

Total Structure Weight: 18303.99

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDYL-LYS METALLOENDOPEPTIDASE A 167 Grifola frondosa EC#: 3.4.24.20 IUBMB
Gene Name(s): MEP
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MAN
Query on MAN

A ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.218
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 43.63 α = 90.00
b = 41.76 β = 95.48
c = 76.94 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-10-10
  • Released Date: 2001-03-14
  • Deposition author(s): Hori, T., Kumasaka, T., Yamamoto, M., Nonaka, T., Tanaka, N., Hashimoto, Y., Ueki, T., Takio, K.

Revision History

  • Version 1_0: 2001-03-14

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description