1F7R

CRYSTAL STRUCTURES OF FELINE IMMUNODEFICIENCY VIRUS DUTP PYROPHOSPHATASE AND ITS NUCLEOTIDE COMPLEXES IN THREE CRYSTAL FORMS.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.192

Literature

Macromolecules
Sequence Display for 1F7R

Classification: Viral protein hydrolase

Total Structure Weight: 15158.63

Macromolecule Entities
Molecule Chains Length Organism Details
POL POLYPROTEIN A 136 Feline immunodeficiency virus EC#: 3.6.1.23 IUBMB
Fragment: DUTPASE
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UDP
Query on UDP

A URIDINE-5'-DIPHOSPHATE
C9 H14 N2 O12 P2
XCCTYIAWTASOJW-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.192
  • Space Group: P 21 3

Unit Cell:

Length (Å) Angle (°)
a = 72.44 α = 90.00
b = 72.44 β = 90.00
c = 72.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-27
  • Released Date: 2000-09-06
  • Deposition author(s): Prasad, G.S., Stura, E.A., Elder, J.H., Stout, C.D.

Revision History

  • Version 1_0: 2000-09-06

    Type: Initial release

  • Version 1_1: 2007-10-16

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Version format compliance