1F3D

CATALYTIC ANTIBODY 4B2 IN COMPLEX WITH ITS AMIDINIUM HAPTEN.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 1F3D

Classification: IMMUNE SYSTEM

Total Structure Weight: 95502.78

Macromolecule Entities
Molecule Chains Length Organism Details
CATALYTIC ANTIBODY 4B2 J, L 219 Mus musculus Fragment: LIGHT CHAIN - FAB FRAGMENT
Gene Name(s): Igkc Igk-C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CATALYTIC ANTIBODY 4B2 H, K 217 Mus musculus Fragment: HEAVY CHAIN - FAB FRAGMENT

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TPM
Query on TPM

J, L 2-(4-AMINOBENZYLAMINO)-3,4,5,6-TETRAHYDROPYRIDINIUM
C12 H18 N3
FWTCHDHYLQERRE-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

K SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.198
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 45.00 α = 90.00
b = 87.20 β = 97.60
c = 128.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-06-02
  • Released Date: 2000-09-13
  • Deposition author(s): Golinelli-Pimpaneau, B., Goncalves, O., Dintinger, T., Blanchard, D., Knossow, M., Tellier, C.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance
  • 2012-07-04
    Type: Version format compliance