1F2N

RICE YELLOW MOTTLE VIRUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.218

Literature

Macromolecules
Sequence Display for 1F2N

Classification: VIRUS

Total Structure Weight: 4688946.50

Macromolecule Entities
Molecule Chains Length Organism Details
CAPSID PROTEIN A, B, C 238 Rice yellow mottle virus Details: COLLECTED FROM RICE FIELD IN THE IVORY COAST AND WAS PROPAGATED UNDER CONTAINED CONDITIONS IN A SUSCEPTIBLE RICE VARIETY IR8 (ORYZA SATIVA L.)
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B, C CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.218
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 283.50 α = 90.00
b = 401.80 β = 89.40
c = 284.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-05-26
  • Released Date: 2000-11-01
  • Deposition author(s): Qu, C., Liljas, L., Opalka, N., Brugidou, C., Yeager, M., Beachy, R.N., Fauquet, C.M., Johnson, J.E., Lin, T.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance