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BOVINE MITOCHONDRIAL F1-ATPASE INHIBITED BY MG2+ADP AND ALUMINIUM FLUORIDE
Biology and Chemistry Report
1E1R
  •   Structure Details   Hide

    Structure Keywords

    Keywords ATP PHOSPHORYLASE
    Text ATP PHOSPHORYLASE, ATP PHOSPHORYLASE (H+ TRANSPORTING), ATP SYNTHASE, F1FO ATP SYNTHASE, F1-ATPASE

    Polymeric Molecules

    Chain A,B,C
    Description BOVINE MITOCHONDRIAL F1-ATPASE 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 55301.8 
    Source Method natural source  
    Entity Name ATP SYNTHASE ALPHA CHAIN HEART ISOFORM 
    Chain D,E,F
    Description BOVINE MITOCHONDRIAL F1-ATPASE 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 51758.5 
    Source Method natural source  
    Entity Name ATP SYNTHASE BETA CHAIN 
    Chain G
    Description BOVINE MITOCHONDRIAL F1-ATPASE 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 30185.9 
    Source Method natural source  
    Entity Name ATP SYNTHASE GAMMA CHAIN 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ADP  ADENOSINE-5'-DIPHOSPHATE  C10 H15 N5 O10 P2   427.20  View 
    AF3  ALUMINUM FLUORIDE  Al F3   83.98  View 
    ANP  PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER  C10 H17 N6 O12 P3   506.20  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
    PO4  PHOSPHATE ION  O4 P   94.97  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C ATPA_BOVIN P05629     
    D,E,F ATPB_BOVIN P00829     
    G ATPG_BOVIN P05631     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    A B C  3.6.3.14        
    D E F  3.6.3.14        
    3.6.3.14        
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C
    GO ID   Ontology GO Term Definition
    6754   ATP Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6811   Ion Transport  The Directed Movement of Charged Atoms or Small Charged Molecules Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    15986   ATP Synthesis Coupled Proton Transport  The Transport of Protons Across a Membrane to Generate an Electrochemical Gradient (proton Motive Force) That Powers ATP Synthesis. 
    15991   ATP Hydrolysis Coupled Proton Transport  The Transport of Protons Against an Electrochemical Gradient Using Energy From ATP Hydrolysis. 
    15992   Proton Transport  The Directed Movement of Protons (hydrogen Ions) Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    46034   ATP Metabolic Process  The Chemical Reactions and Pathways Involving ATP Adenosine Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    5739   Mitochondrion  A Semiautonomous Self Replicating Organelle That Occurs in Varying Numbers Shapes and Sizes in the Cytoplasm of Virtually All Eukaryotic Cells. It Is Notably the Site of Tissue Respiration. 
    5743   Mitochondrial Inner Membrane  The Inner I.e. Lumen Facing Lipid Bilayer of the Mitochondrial Envelope. It Is Highly Folded to Form Cristae. 
    5753   Mitochondrial Proton Transporting ATP Synthase Complex  A Proton Transporting ATP Synthase Complex Found in the Mitochondrial Membrane. 
    5886   Plasma Membrane  The Membrane Surrounding a Cell That Separates the Cell From Its External Environment. It Consists of a Phospholipid Bilayer and Associated Proteins. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    33178   Proton Transporting Two Sector Atpase Complex Catalytic Domain  A Protein Complex That Forms Part of a Proton Transporting Two Sector Atpase Complex and Catalyzes ATP Hydrolysis or Synthesis. the Catalytic Domain (f1 V1 or A1) Comprises a Hexameric Catalytic Core and a Central Stalk and Is Peripherally Associated with the Membrane When the Two Sector Atpase Is Assembled. 
    45261   Proton Transporting ATP Synthase Complex Catalytic Core F(1)  The Sector of a Hydrogen Transporting ATP Synthase Complex in Which the Catalytic Activity Resides; It Comprises the Catalytic Core and Central Stalk and Is Peripherally Associated with a Membrane Such As the Plasma Membrane or the Mitochondrial Inner Membrane When the Entire ATP Synthase Is Assembled. 
    166   Nucleotide Binding  Interacting Selectively and Non Covalently with a Nucleotide Any Compound Consisting of a Nucleoside That Is Esterified with (ortho)phosphate or an Oligophosphate At Any Hydroxyl Group On the Ribose or Deoxyribose. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    16820   Hydrolase Activity Acting On Acid Anhydrides Catalyzing Transmembrane Movement of Substances  Catalysis of the Hydrolysis of an Acid Anhydride to Directly Drive the Transport of a Substance Across a Membrane. 
    46933   Proton Transporting ATP Synthase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: Adp + H2o + Phosphate + H+(in) = ATP + H+(out) by a Rotational Mechanism. 
    46961   Proton Transporting Atpase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: ATP + H2o + H+(in) = Adp + Phosphate + H+(out) by a Rotational Mechanism. 
    Chain D,E,F
    GO ID   Ontology GO Term Definition
    1525   Angiogenesis  Blood Vessel Formation When New Vessels Emerge From the Proliferation of Pre Existing Blood Vessels. 
    1649   Osteoblast Differentiation  The Process Whereby a Relatively Unspecialized Cell Acquires the Specialized Features of an Osteoblast a Mesodermal or Neural Crest Cell That Gives Rise to Bone. 
    6200   ATP Catabolic Process  The Chemical Reactions and Pathways Resulting in the Breakdown of ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    6629   Lipid Metabolic Process  The Chemical Reactions and Pathways Involving Lipids Compounds Soluble in an Organic Solvent But Not or Sparingly in an Aqueous Solvent. Includes Fatty Acids; Neutral Fats Other Fatty Acid Esters and Soaps; Long Chain (fatty) Alcohols and Waxes; Sphingoids and Other Long Chain Bases; Glycolipids Phospholipids and Sphingolipids; and Carotenes Polyprenols Sterols Terpenes and Other Isoprenoids. 
    6754   ATP Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6811   Ion Transport  The Directed Movement of Charged Atoms or Small Charged Molecules Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    6933   Negative Regulation of Cell Adhesion Involved in Substrate Bound Cell Migration  The Disassembly of Adhesions At the Front and Rear of a Migrating Cell. At the Leading Edge Adhesion Disassembly Accompanies the Formation of New Protrusions; At the Cell Rear It Promotes Tail Retraction. 
    15986   ATP Synthesis Coupled Proton Transport  The Transport of Protons Across a Membrane to Generate an Electrochemical Gradient (proton Motive Force) That Powers ATP Synthesis. 
    15991   ATP Hydrolysis Coupled Proton Transport  The Transport of Protons Against an Electrochemical Gradient Using Energy From ATP Hydrolysis. 
    15992   Proton Transport  The Directed Movement of Protons (hydrogen Ions) Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    46034   ATP Metabolic Process  The Chemical Reactions and Pathways Involving ATP Adenosine Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    51453   Regulation of Intracellular Ph  Any Process That Modulates the Internal Ph of a Cell Measured by the Concentration of the Hydrogen Ion. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5739   Mitochondrion  A Semiautonomous Self Replicating Organelle That Occurs in Varying Numbers Shapes and Sizes in the Cytoplasm of Virtually All Eukaryotic Cells. It Is Notably the Site of Tissue Respiration. 
    5743   Mitochondrial Inner Membrane  The Inner I.e. Lumen Facing Lipid Bilayer of the Mitochondrial Envelope. It Is Highly Folded to Form Cristae. 
    5753   Mitochondrial Proton Transporting ATP Synthase Complex  A Proton Transporting ATP Synthase Complex Found in the Mitochondrial Membrane. 
    5886   Plasma Membrane  The Membrane Surrounding a Cell That Separates the Cell From Its External Environment. It Consists of a Phospholipid Bilayer and Associated Proteins. 
    9986   Cell Surface  The External Part of the Cell Wall And/or Plasma Membrane. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    31966   Mitochondrial Membrane  Either of the Lipid Bilayers That Surround the Mitochondrion and Form the Mitochondrial Envelope. 
    33178   Proton Transporting Two Sector Atpase Complex Catalytic Domain  A Protein Complex That Forms Part of a Proton Transporting Two Sector Atpase Complex and Catalyzes ATP Hydrolysis or Synthesis. the Catalytic Domain (f1 V1 or A1) Comprises a Hexameric Catalytic Core and a Central Stalk and Is Peripherally Associated with the Membrane When the Two Sector Atpase Is Assembled. 
    42645   Mitochondrial Nucleoid  The Region of a Mitochondrion to Which the DNA Is Confined. 
    45261   Proton Transporting ATP Synthase Complex Catalytic Core F(1)  The Sector of a Hydrogen Transporting ATP Synthase Complex in Which the Catalytic Activity Resides; It Comprises the Catalytic Core and Central Stalk and Is Peripherally Associated with a Membrane Such As the Plasma Membrane or the Mitochondrial Inner Membrane When the Entire ATP Synthase Is Assembled. 
    70062   Extracellular Vesicular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. 
    166   Nucleotide Binding  Interacting Selectively and Non Covalently with a Nucleotide Any Compound Consisting of a Nucleoside That Is Esterified with (ortho)phosphate or an Oligophosphate At Any Hydroxyl Group On the Ribose or Deoxyribose. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 
    16820   Hydrolase Activity Acting On Acid Anhydrides Catalyzing Transmembrane Movement of Substances  Catalysis of the Hydrolysis of an Acid Anhydride to Directly Drive the Transport of a Substance Across a Membrane. 
    16887   Atpase Activity  Catalysis of the Reaction: ATP + H2o = Adp + Phosphate + 2 H+. May or May Not Be Coupled to Another Reaction. 
    42288   Mhc Class I Protein Binding  Interacting Selectively and Non Covalently with Major Histocompatibility Complex Class I Molecules; a Set of Molecules Displayed On Cell Surfaces That Are Responsible For Lymphocyte Recognition and Antigen Presentation. 
    46933   Proton Transporting ATP Synthase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: Adp + H2o + Phosphate + H+(in) = ATP + H+(out) by a Rotational Mechanism. 
    46961   Proton Transporting Atpase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: ATP + H2o + H+(in) = Adp + Phosphate + H+(out) by a Rotational Mechanism. 
    Chain G
    GO ID   Ontology GO Term Definition
    6200   ATP Catabolic Process  The Chemical Reactions and Pathways Resulting in the Breakdown of ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    6754   ATP Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6811   Ion Transport  The Directed Movement of Charged Atoms or Small Charged Molecules Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    15986   ATP Synthesis Coupled Proton Transport  The Transport of Protons Across a Membrane to Generate an Electrochemical Gradient (proton Motive Force) That Powers ATP Synthesis. 
    15992   Proton Transport  The Directed Movement of Protons (hydrogen Ions) Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    5739   Mitochondrion  A Semiautonomous Self Replicating Organelle That Occurs in Varying Numbers Shapes and Sizes in the Cytoplasm of Virtually All Eukaryotic Cells. It Is Notably the Site of Tissue Respiration. 
    5743   Mitochondrial Inner Membrane  The Inner I.e. Lumen Facing Lipid Bilayer of the Mitochondrial Envelope. It Is Highly Folded to Form Cristae. 
    5753   Mitochondrial Proton Transporting ATP Synthase Complex  A Proton Transporting ATP Synthase Complex Found in the Mitochondrial Membrane. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    45261   Proton Transporting ATP Synthase Complex Catalytic Core F(1)  The Sector of a Hydrogen Transporting ATP Synthase Complex in Which the Catalytic Activity Resides; It Comprises the Catalytic Core and Central Stalk and Is Peripherally Associated with a Membrane Such As the Plasma Membrane or the Mitochondrial Inner Membrane When the Entire ATP Synthase Is Assembled. 
    70062   Extracellular Vesicular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    16887   Atpase Activity  Catalysis of the Reaction: ATP + H2o = Adp + Phosphate + 2 H+. May or May Not Be Coupled to Another Reaction. 
    44822   Poly(a) RNA Binding  Interacting Non Covalently with a Poly(a) RNA a RNA Molecule Which Has a Tail of Adenine Bases. 
    46933   Proton Transporting ATP Synthase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: Adp + H2o + Phosphate + H+(in) = ATP + H+(out) by a Rotational Mechanism. 
    46961   Proton Transporting Atpase Activity Rotational Mechanism  Catalysis of the Transfer of Protons From One Side of a Membrane to the Other According to the Reaction: ATP + H2o + H+(in) = Adp + Phosphate + H+(out) by a Rotational Mechanism. 


     
  •   Gene Details   Hide

    Natural Source

    Chain G
    Common Name Bovine
    Scientific Name Bos taurus  
    Organ Heart
    Organelle Mitochondrion
    Tissue Muscle
    Chain D,E,F
    Common Name Bovine
    Scientific Name Bos taurus  
    Organ Heart
    Organelle Mitochondrion
    Tissue Muscle
    Chain A,B,C
    Common Name Bovine
    Scientific Name Bos taurus  
    Organ Heart
    Organelle Mitochondrion
    Tissue Muscle

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    5 - 327675     ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide ATP5B    
    13 - 327668     ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 ATP5C1    
    24 - 282578     ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle ATP5A1