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PARTIAL STRUCTURE OF 16S RNA OF THE SMALL RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS
Biology and Chemistry Report
1DV4
  •   Structure Details   Hide

    Structure Keywords

    Keywords RIBOSOME
    Text RIBOSOMES, 30S, THERMUS THERMOPHILUS, 16S RNA, RIBOSOME

    Polymeric Molecules

    Chain A
    Description 16S RIBOSOMAL RNA 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 70942.0 
    Source Method natural source  
    Chain E
    Description RIBOSOMAL PROTEIN S5 
    Fragment RESIDUES 4-148 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15240.9 
    Source Method natural source  
    Entity Name BS5 
    Chain G
    Description RIBOSOMAL PROTEIN S7 
    Fragment RESIDUES 12-146 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15343.0 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    WO2  OCTADECATUNGSTENYL DIPHOSPHATE  O62 P2 W18   4363.03  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    E RS5_GEOSE P02357     
    G RS7_THET8 P17291     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain E
    GO ID   Ontology GO Term Definition
    6412   Translation  The Cellular Metabolic Process in Which a Protein Is Formed Using the Sequence of a Mature MRNA Molecule to Specify the Sequence of Amino Acids in a Polypeptide Chain. Translation Is Mediated by the Ribosome and Begins with the Formation of a Ternary Complex Between Aminoacylated Initiator Methionine TRNA GTP and Initiation Factor 2 Which Subsequently Associates with the Small Subunit of the Ribosome and an Mrna. Translation Ends with the Release of a Polypeptide Chain From the Ribosome. 
    5840   Ribosome  An Intracellular Organelle About 200 a in Diameter Consisting of RNA and Protein. It Is the Site of Protein Biosynthesis Resulting From Translation of Messenger RNA (mrna). It Consists of Two Subunits One Large and One Small Each Containing Only Protein and Rna. Both the Ribosome and Its Subunits Are Characterized by Their Sedimentation Coefficients Expressed in Svedberg Units (symbol: S). Hence the Prokaryotic Ribosome (70s) Comprises a Large (50s) Subunit and a Small (30s) Subunit While the Eukaryotic Ribosome (80s) Comprises a Large (60s) Subunit and a Small (40s) Subunit. Two Sites On the Ribosomal Large Subunit Are Involved in Translation Namely the Aminoacyl Site (a Site) and Peptidyl Site (p Site). Ribosomes From Prokaryotes Eukaryotes Mitochondria and Chloroplasts Have Characteristically Distinct Ribosomal Proteins. 
    15935   Small Ribosomal Subunit  The Smaller of the Two Subunits of a Ribosome. 
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3735   Structural Constituent of Ribosome  The Action of a Molecule That Contributes to the Structural Integrity of the Ribosome. 
    Chain G
    GO ID   Ontology GO Term Definition
    6412   Translation  The Cellular Metabolic Process in Which a Protein Is Formed Using the Sequence of a Mature MRNA Molecule to Specify the Sequence of Amino Acids in a Polypeptide Chain. Translation Is Mediated by the Ribosome and Begins with the Formation of a Ternary Complex Between Aminoacylated Initiator Methionine TRNA GTP and Initiation Factor 2 Which Subsequently Associates with the Small Subunit of the Ribosome and an Mrna. Translation Ends with the Release of a Polypeptide Chain From the Ribosome. 
    15935   Small Ribosomal Subunit  The Smaller of the Two Subunits of a Ribosome. 
    3735   Structural Constituent of Ribosome  The Action of a Molecule That Contributes to the Structural Integrity of the Ribosome. 


     
  •   Gene Details   Hide

    Natural Source

    Chain G
    Scientific Name Thermus thermophilus  
    Genus Thermus
    Chain E
    Scientific Name Geobacillus stearothermophilus  
    Genus Geobacillus
    Chain A
    Scientific Name Thermus thermophilus  
    Genus Thermus

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 3167931     30S ribosomal protein S7 TTHA1696