1DM3

ACETYLATED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH ACETYL-COA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1DM3

Classification: TRANSFERASE

Total Structure Weight: 165006.45

Macromolecule Entities
Molecule Chains Length Organism Details
BIOSYNTHETIC THIOLASE ACETYLATED AT CYS89 A, B, C, D 389 Zoogloea ramigera EC#: 2.3.1.9 IUBMB
Fragment: ENTIRE THIOLASE, ACETYLATED AT CYS89
Mutation: C89X, A129R
Gene Name(s): phbA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACO
Query on ACO

A, B, C, D ACETYL COENZYME *A
C23 H38 N7 O17 P3 S
ZSLZBFCDCINBPY-ZSJPKINUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SCY
Query on SCY
A, B, C, D L-PEPTIDE LINKING C5 H9 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.214
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 84.38 α = 90.00
b = 78.85 β = 93.51
c = 149.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-13
  • Released Date: 2001-08-29
  • Deposition author(s): Modis, Y., Wierenga, R.K.

Revision History

  • Version 1_0: 2001-08-29

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Advisory, Refinement description