POP-OUT | CLOSE
 
SOLUTION STRUCTURE OF HUMAN TFIIB N-TERMINAL DOMAIN
Biology and Chemistry Report
1DL6
  •   Structure Details   Hide

    Structure Keywords

    Keywords GENE REGULATION
    Text ZINC RIBBON, GENE REGULATION

    Polymeric Molecules

    Chain A
    Description TRANSCRIPTION FACTOR II B (TFIIB) 
    Fragment N-TERMINAL DOMAIN 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 6369.2 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A TF2B_HUMAN A8K1A7     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Plasmid Name PET21B


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1p22-p21 2959     general transcription factor IIB GTF2B    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs11546873 LS-SNP   dbSNP   A 14 T - > S Bend 25% (Intermediate) 1 89353028
    rs1804499 LS-SNP   dbSNP   A 19 P - > S Bend 68% (Exposed) 1 89353013
    rs138269428 LS-SNP   dbSNP   A 21 A - > V Bend 10% (Intermediate) 1 89353006 ZN
    rs202186098 LS-SNP   dbSNP   A 30 G - > S Coil 23% (Intermediate) 1 89352980