1D4I

HIV-1 protease in complex with the inhibitor BEA425


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.81 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 1D4I

Classification: HYDROLASE

Total Structure Weight: 22244.24

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 PROTEASE A, B 99 Human immunodeficiency virus EC#: 3.4.23.16 IUBMB
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BEG
Query on BEG

A 2,5-DIBENZYLOXY-3-HYDROXY-HEXANEDIOIC ACID BIS- [(2-HYDROXY-INDAN-1-YL)-AMIDE]
INHIBITOR BEA425 (Synonym)
C38 H40 N2 O7
AHAVBKNGKPWROK-UMFPTGFGSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BEG Ki: 1.4 nM (98) BindingDB

Ki: 1.4 nM  BindingMOAD
Ki: 1.40 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.81 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.191
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 58.62 α = 90.00
b = 86.32 β = 90.00
c = 46.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-04
  • Released Date: 2002-06-26
  • Deposition author(s): Unge, T.

Revision History

  • Version 1_0: 2002-06-26

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance