1CF2

THREE-DIMENSIONAL STRUCTURE OF D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC ARCHAEON METHANOTHERMUS FERVIDUS


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 1CF2

Classification: OXIDOREDUCTASE

Total Structure Weight: 153177.05

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE) O, P, Q, R 337 Methanothermus fervidus EC#: 1.2.1.12 IUBMB
Gene Name(s): gap
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

O, P, Q, R NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

O, P, Q, R SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.194
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 136.66 α = 90.00
b = 153.28 β = 90.00
c = 74.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-24
  • Released Date: 2000-03-29
  • Deposition author(s): Charron, C., Talfournier, F., Isuppov, M.N., Branlant, G., Littlechild, J.A., Vitoux, B., Aubry, A.

Revision History

  • Version 1_0: 2000-03-29

    Type: Initial release

  • Version 1_1: 2008-04-26

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance