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PROTEIN-RNA INTERACTIONS IN AN ICOSAHEDRAL VIRUS AT 3.0 ANGSTROMS RESOLUTION
Biology and Chemistry Report
1BMV
  •   Structure Details   Hide

    Structure Keywords

    Keywords Virus/RNA
    Text PROTEIN-RNA COMPLEX, SINGLE STRAND, Icosahedral virus, Virus-RNA COMPLEX

    Polymeric Molecules

    Chain M
    Description RNA (5'-R(*GP*GP*UP*CP*AP*AP*AP*AP*UP*GP*C)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 3530.2 
    Source Method synthetic  
    Chain 1
    Description PROTEIN (ICOSAHEDRAL VIRUS - A DOMAIN) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 21914.7 
    Source Method genetically manipulated  
    Chain 2
    Description PROTEIN (ICOSAHEDRAL VIRUS - B AND C DOMAIN) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 41224.0 
    Source Method genetically manipulated  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    1 POL2_BPMV P23009     
    2 POL2_BPMV P23009     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain 1
    GO ID   Ontology GO Term Definition
    46740   Transport of Virus in Host Cell to Cell  The Transport of a Virus Between Adjacent Cells in a Multicellular Organism. 
    19028   Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles. It Comprises Numerous Regularly Arranged Subunits or Capsomeres. 
    44219   Host Cell Plasmodesma  A Fine Cytoplasmic Channel Found in All Higher Plants That Connects the Cytoplasm of One Host Cell to That of an Adjacent Host Cell. 
    Chain 2
    GO ID   Ontology GO Term Definition
    19028   Viral Capsid  The Protein Coat That Surrounds the Infective Nucleic Acid in Some Virus Particles. It Comprises Numerous Regularly Arranged Subunits or Capsomeres. 
    5198   Structural Molecule Activity  The Action of a Molecule That Contributes to the Structural Integrity of a Complex or Assembly Within or Outside a Cell. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain 2
    Scientific Name Bean pod mottle virus  
    Genus Comovirus
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Bl21(de3)plyss


    Chain 1
    Scientific Name Bean pod mottle virus  
    Genus Comovirus
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Bl21(de3)plyss