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Human activated protein C
Biology and Chemistry Report
1AUT
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/HYDROLASE INHIBITOR
    Text SERINE PROTEINASE, PLASMA CALCIUM BINDING, GLYCOPROTEIN, HYDROLASE-HYDROLASE INHIBITOR complex, BLOOD CLOTTING

    Polymeric Molecules

    Chain C
    Description ACTIVATED PROTEIN C 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 28091.3 
    Source Method natural source  
    Entity Name AUTOPROTHROMBIN IIA 
    Chain L
    Description ACTIVATED PROTEIN C 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 12730.7 
    Source Method natural source  
    Entity Name AUTOPROTHROMBIN IIA 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    0G6  D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide  C21 H34 Cl N6 O3   453.99  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    C PROC_HUMAN P04070     
    L PROC_HUMAN P04070     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc Catalytic Site(s)
    3.4.21.69        
    3.4.21.69        
     
  •   Gene Details   Hide

    Natural Source

    Chain L
    Common Name Human
    Scientific Name Homo sapiens  
    Organ Plasma
    Tissue Plasma
    Chain C
    Common Name Human
    Scientific Name Homo sapiens  
    Organ Plasma
    Tissue Plasma

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    2 2q13-q14 5624     protein C (inactivator of coagulation factors Va and VIIIa) PROC    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs121918152 LS-SNP   dbSNP   C 24 R - > W Turn 45% (Exposed) 2 128183783
    rs121918153 LS-SNP   dbSNP   C 24 R - > Q Turn 45% (Exposed) 2 128183784
    rs199469483 LS-SNP   dbSNP   C 27 S - > R Coil 12% (Intermediate) 2 128183794
    rs121918155 LS-SNP   dbSNP   C 30 Q - > H Beta Ladder 2% (Buried) 2 128183803
    rs145868088 LS-SNP   dbSNP   C 41 A - > V Beta Ladder 9% (Intermediate) 2 128184712
    rs121918156 LS-SNP   dbSNP   C 69 L - > F Bend 10% (Intermediate) 2 128184795
    rs121918154 LS-SNP   dbSNP   C 76 R - > C Coil 56% (Exposed) 2 128185950
    rs121918151 LS-SNP   dbSNP   C 93 P - > L Turn 81% (Exposed) 2 128186002
    rs202150408 LS-SNP   dbSNP   C 96 S - > N Turn 76% (Exposed) 2 128186011
    rs144233408 LS-SNP   dbSNP   C 97 K - > R Turn 79% (Exposed) 2 128186014 0G6
    rs200721675 LS-SNP   dbSNP   C 98 S - > N Turn 30% (Intermediate) 2 128186017 0G6
    rs199469471 LS-SNP   dbSNP   C 101 D - > H Turn 18% (Intermediate) 2 128186025
    rs121918144 LS-SNP   dbSNP   C 105 A - > V Beta Ladder 0% (Buried) 2 128186038
    rs121918146 LS-SNP   dbSNP   C 113 A - > T Coil 68% (Exposed) 2 128186061
    rs121918160 LS-SNP   dbSNP   C 116 S - > L Turn 54% (Exposed) 2 128186071
    rs199469480 LS-SNP   dbSNP   C 131 E - > V Bend 63% (Exposed) 2 128186116
    rs201907715 LS-SNP   dbSNP   C 132 R - > C Turn 47% (Exposed) 2 128186118
    rs121918150 LS-SNP   dbSNP   C 138 G - > S Beta Ladder 0% (Buried) 2 128186136
    rs121918158 LS-SNP   dbSNP   C 143 V - > M Coil 77% (Exposed) 2 128186151
    rs121918147 LS-SNP   dbSNP   C 147 G - > S Coil 87% (Exposed) 2 128186163
    rs201827066 LS-SNP   dbSNP   C 152 R - > Q Bend 42% (Exposed) 2 128186179
    rs140582220 LS-SNP   dbSNP   C 171 V - > M Helix 34% (Intermediate) 2 128186235
    rs145800354 LS-SNP   dbSNP   C 175 N - > D Coil 74% (Exposed) 2 128186247
    rs201399407 LS-SNP   dbSNP   C 203 E - > A Beta Ladder 7% (Buried) 2 128186332
    rs142742242 LS-SNP   dbSNP   C 205 D - > N Turn 60% (Exposed) 2 128186337
    rs139741458 LS-SNP   dbSNP   C 216 G - > S Coil 5% (Buried) 2 128186370 0G6
    rs144760718 LS-SNP   dbSNP   C 221 V - > L Bend 1% (Buried) 2 128186385 0G6
    rs199469472 LS-SNP   dbSNP   C 224 V - > L Coil 8% (Buried) 2 128186394