1A7C

HUMAN PLASMINOGEN ACTIVATOR INHIBITOR TYPE-1 IN COMPLEX WITH A PENTAPEPTIDE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 1A7C

Classification: HYDROLASE INHIBITOR / PEPTIDE

Total Structure Weight: 44665.91

Macromolecule Entities
Molecule Chains Length Organism Details
PLASMINOGEN ACTIVATOR INHIBITOR TYPE 1 A 379 Homo sapiens Mutation: A335E
Gene Name(s): SERPINE1 Gene View PAI1 PLANH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PENTAPEPTIDE B, C 7 synthetic

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RIP
Query on RIP

A RIBOSE(PYRANOSE FORM)
C5 H10 O5
SRBFZHDQGSBBOR-TXICZTDVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
B, C NON-POLYMER C2 H4 O --
NH2
Query on NH2
B, C NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.181
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 63.12 α = 90.00
b = 83.37 β = 90.00
c = 101.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-03-12
  • Released Date: 1999-03-23
  • Deposition author(s): Xue, Y., Inghardt, T., Sjolin, L., Deinum, J.

Revision History

  • Version 1_0: 1999-03-23

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance

  • Version 1_3: 2012-02-29

    Type: Derived calculations