193D

SOLUTION STRUCTURE OF A QUINOMYCIN BISINTERCALATOR-DNA COMPLEX


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 4
  • Conformers Submitted: 4
  • Selection Criteria: All Calculated Structures Submitted

Literature

Macromolecules
Sequence Display for 193D

Classification: DNA / ANTIBIOTIC

Total Structure Weight: 6078.62


Macromolecule Entities
Molecule Chains Length Organism Details
QUINOMYCIN C 8 Streptomyces
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*CP*AP*CP*GP*TP*GP*T)-3') A, B 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HQU
Query on HQU

C 3-HYDROXYQUINALDIC ACID
C10 H7 N O3
WHKZBVQIMVUGIH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000492
Query on PRD_000492
C uk63052 Cyclic depsipeptide /
Antibiotic
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 4
  • Conformers Submitted: 4
  • Selection Criteria: all calculated structures submitted

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-09-30
  • Released Date: 1995-02-27
  • Deposition author(s): Chen, H., Patel, D.J.

Revision History

  • Version 1_0: 1995-02-27

    Type: Initial release

  • Version 1_1: 2011-06-14

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2011-07-27

    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary

  • Version 1_4: 2012-12-12

    Type: Other

  • Version 2_0: 2017-11-01

    Type: Advisory, Atomic model, Derived calculations, Other