6XIM

PROTEIN ENGINEERING OF XYLOSE (GLUCOSE) ISOMERASE FROM ACTINOPLANES MISSOURIENSIS. 1. CRYSTALLOGRAPHY AND SITE-DIRECTED MUTAGENESIS OF METAL BINDING SITES

Structural Biology Knowledgebase: 6XIM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.151

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 6XIM

Classification: ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)

Total Structure Weight: 174482.97

Macromolecule Entities
Molecule Chains Length Organism Details
D-XYLOSE ISOMERASE A, B, C, D 393 Actinoplanes missouriensis EC#: 5.3.1.5 IUBMB
Gene Name(s): xylA XI AMIS_10350

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XLS
Query on XLS

A, B, C, D D-XYLOSE (LINEAR FORM)
C5 H10 O5
PYMYPHUHKUWMLA-VPENINKCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.151
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 143.45 α = 90.00
b = 143.45 β = 90.00
c = 231.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1992-04-03
  • Released Date: 1993-07-15
  • Deposition author(s): Janin, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4