6UEV

Structure of unliganded tRNA (guanine-N1)-methyltransferase found in Anaplasma phagocytophilum


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.183 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of unliganded tRNA (guanine-N1)-methyltransferase found in Anaplasma phagocytophilum

Jannotta, C.Edele, D.Levanti, D.Carson, M.Prucha, G.Caesar, J.Collins, K.Garland, E.Handley-Pendleton, J.Hernandez, V.Leffler, S.Williams, D.Stojanoff, V.Perez, A.Halloran, J.Bolen, R.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
tRNA (guanine-N(1)-)-methyltransferase219Anaplasma phagocytophilumMutation(s): 0 
Gene Names: trmDANAPC1_01054ANAPH1_00521ANAPH2_00749
EC: 2.1.1.228
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.183 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 104.57α = 90
b = 104.57β = 90
c = 91.08γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)United StatesP41GM111244
Department of Energy (DOE, United States)United StatesDE-SC0012704
Department of Energy (DOE, United States)United StatesKP1605010

Revision History  (Full details and data files)

  • Version 1.0: 2019-10-09
    Type: Initial release
  • Version 1.1: 2019-12-04
    Changes: Author supporting evidence
  • Version 1.2: 2023-10-11
    Changes: Data collection, Database references, Refinement description