6SE7

R600A mutant from Mycoplasma genitalium P110 Adhesin at 1.87 Angstroms resolution

• PDB DOI: https://doi.org/10.2210/pdb6SE7/pdb

• Classification: SUGAR BINDING PROTEIN
• Organism(s): Mycoplasmoides genitalium G37
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2019-07-29 Released: 2020-08-26 
• Deposition Author(s): Fita, I., Aparicio, D.
• Funding Organization(s): Spanish Ministry of Science, Innovation, and Universities

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.87 Å
• R-Value Free: 0.207 
• R-Value Work: 0.172 
• R-Value Observed: 0.174 

Literature

R600A mutant from Mycoplasma genitalium P110 Adhesin at 1.87 Angstroms resolution

Fita, I., Aparicio, D.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 100.51 kDa 
• Atom Count: 7,515 
• Modelled Residue Count: 885 
• Deposited Residue Count: 923 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Mgp-operon protein 3	A	923	Mycoplasmoides genitalium G37	Mutation(s): 0  Gene Names: MG192
UniProt
Find proteins for P22747 (Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)) Explore P22747  Go to UniProtKB:  P22747

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
K	B [auth A]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.87 Å
• R-Value Free: 0.207 
• R-Value Work: 0.172 
• R-Value Observed: 0.174 
• Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 109.393	α = 90
b = 150.696	β = 90
c = 176.221	γ = 90

Software Package:

Software Name	Purpose
BUSTER	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
autoPROC	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2020-08-26 
Deposition Author(s): Fita, I., Aparicio, D.

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Funding Organization	Location	Grant Number
Spanish Ministry of Science, Innovation, and Universities	Spain	MDM-2014-0435

Revision History  

• Version 1.0: 2020-08-26
  Type: Initial release
  
• Version 1.1: 2024-01-24
  Changes: Data collection, Database references, Refinement description