6R5J

New MAX Effector from Magnaporthe oryzae

PDB DOI: https://doi.org/10.2210/pdb6R5J/pdb

Classification: IMMUNOSUPPRESSANT
Organism(s): Pyricularia oryzae P131
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2019-03-25 Released: 2020-05-06
Deposition Author(s): Hoh, F., Padilla, A., De Guillen, K.
Funding Organization(s): French National Research Agency

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.38 Å
R-Value Free: 0.171
R-Value Work: 0.143
R-Value Observed: 0.144

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

New MAX Effector from Magnaporthe oryzae

Hoh, F., Padilla, A., De Guillen, K.

To be published.

Macromolecule Content

Total Structure Weight: 14.35 kDa
Atom Count: 1,118
Modelled Residue Count: 135
Deposited Residue Count: 136
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B [auth C]	68	Pyricularia oryzae P131	Mutation(s): 0 Gene Names: OOW_P131scaffold00585g1
UniProt
Find proteins for L7J9X7 (Pyricularia oryzae (strain P131)) Explore L7J9X7 Go to UniProtKB: L7J9X7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	L7J9X7
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
P6G Query on P6G Download Ideal Coordinates CCD File SDF format, chain C MOL2 format, chain C	C	HEXAETHYLENE GLYCOL C₁₂ H₂₆ O₇ IIRDTKBZINWQAW-UHFFFAOYSA-N		Interactions Focus chain C Interactions & Density Focus chain C

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.38 Å
R-Value Free: 0.171
R-Value Work: 0.143
R-Value Observed: 0.144
Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 73.341	α = 90
b = 24.76	β = 100.88
c = 68.613	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2020-05-06

Deposition Author(s):

Funding Organization	Location	Grant Number
French National Research Agency	France	ANR-18-CE20-0016

Revision History (Full details and data files)

Version 1.0: 2020-05-06
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.