6N44

Sheep Galectin-11 (LGALS11) complex with glycerol


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.195 

wwPDB Validation   3D Report Full Report

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This is version 1.2 of the entry. See complete history


Literature

The oligomeric assembly of galectin-11 is critical for anti-parasitic activity in sheep (Ovis aries).

Sakthivel, D.Preston, S.Gasser, R.B.Costa, T.P.S.D.Hernandez, J.N.Shahine, A.Shakif-Azam, M.D.Lock, P.Rossjohn, J.Perugini, M.A.Gonzalez, J.F.Meeusen, E.Piedrafita, D.Beddoe, T.

(2020) Commun Biol 3: 464-464

  • DOI: https://doi.org/10.1038/s42003-020-01179-7
  • Primary Citation of Related Structures:  
    6N44

  • PubMed Abstract: 

    Galectins are a family of glycan-binding molecules with a characteristic affinity for ß-D-glycosides that mediate a variety of important cellular functions, including immune and inflammatory responses. Galectin-11 (LGALS-11) has been recently identified as a mediator induced specifically in animals against gastrointestinal nematodes and can interfere with parasite growth and development. Here, we report that at least two natural genetic variants of LGALS-11 exist in sheep, and demonstrate fundamental differences in anti-parasitic activity, correlated with their ability to dimerise. This study improves our understanding of the role of galectins in the host immune and inflammatory responses against parasitic nematodes and provides a basis for genetic studies toward selective breeding of animals for resistance to parasites.


  • Organizational Affiliation

    Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC, 3800, Australia.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Galectin
A, B, C, D, E
A, B, C, D, E, F, G, H
139Ovis ariesMutation(s): 0 
UniProt
Find proteins for A0A0A7EMW6 (Ovis aries)
Explore A0A0A7EMW6 
Go to UniProtKB:  A0A0A7EMW6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0A7EMW6
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.238 
  • R-Value Work: 0.192 
  • R-Value Observed: 0.195 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 96.17α = 90
b = 127.45β = 90
c = 141.41γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
MOSFLMdata reduction
Aimlessdata scaling
MOLREPphasing
PDB_EXTRACTdata extraction

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-05-20
    Type: Initial release
  • Version 1.1: 2021-08-11
    Changes: Database references
  • Version 1.2: 2023-10-11
    Changes: Data collection, Refinement description