5UPR

X-ray structure of a putative triosephosphate isomerase from Toxoplasma gondii ME49


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.168 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

X-ray structure of a putative triosephosphate isomerase from Toxoplasma gondii ME49

Filippova, E.V.Wawrzak, Z.Minasov, G.Cardona-Correa, A.Bishop, B.Anderson, W.F.Ngo, H.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Triosephosphate isomerase
A, B, C, D
265Toxoplasma gondii ME49Mutation(s): 0 
Gene Names: TPI-IITGME49_233500
EC: 5.3.1.1
UniProt
Find proteins for A0A125YP67 (Toxoplasma gondii (strain ATCC 50611 / Me49))
Explore A0A125YP67 
Go to UniProtKB:  A0A125YP67
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A125YP67
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 56.368α = 90
b = 115.533β = 90.02
c = 78.719γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
PHENIXphasing
Cootmodel building

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2017-02-22
    Type: Initial release
  • Version 1.1: 2017-07-19
    Changes: Database references, Structure summary
  • Version 1.2: 2017-11-22
    Changes: Refinement description