Crystal structure of Ofd2 in complex with 2OG from Schizosaccharomyces pombe
Wang, J., Gao, Y.X., Guo, G.R., Zhu, Z.L., Niu, L.W., Teng, M.K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uncharacterized protein P8A3.02c | 184 | Schizosaccharomyces pombe 972h- | Mutation(s): 2  Gene Names: SPAP8A3.02c | ||
UniProt | |||||
Find proteins for Q9UT12 (Schizosaccharomyces pombe (strain 972 / ATCC 24843)) Explore Q9UT12  Go to UniProtKB:  Q9UT12 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9UT12 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AKG Query on AKG | C [auth A] | 2-OXOGLUTARIC ACID C5 H6 O5 KPGXRSRHYNQIFN-UHFFFAOYSA-N | |||
ACT Query on ACT | D [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FE Query on FE | B [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 71.114 | α = 90 |
b = 80.312 | β = 90 |
c = 82.607 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
DENZO | data reduction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Chinese Ministry of Science and Technology | China | 2012CB917200 |
Chinese Ministry of Science and Technology | China | 2011CBA00800 |
Chinese National Natural Science Foundation | China | 31130018 |
Chinese National Natural Science Foundation | China | 31170726 |