Crystal structure of tetrameric Nucleoside diphosphate kinase at 1.98 A resolution from Acinetobacter baumannii
Bairagya, H.R., Sikarwar, J., Iqbal, N., Singh, P.K., Kaur, P., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nucleoside diphosphate kinase | 143 | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 | Mutation(s): 0  Gene Names: ndk, F911_03401, HMPREF0010_01731 EC: 2.7.4.6 | ||
UniProt | |||||
Find proteins for D0CAF1 (Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)) Explore D0CAF1  Go to UniProtKB:  D0CAF1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D0CAF1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MG Query on MG | E [auth A], F [auth A], G [auth A], H [auth C], I [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 145.88 | α = 90 |
b = 70.47 | β = 109.4 |
c = 68.85 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
MOLREP | phasing |