5VSI

CH1/Ckappa Fab mutant 15.1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 5VSI

Classification: IMMUNE SYSTEM

Total Structure Weight: 47840.85

Macromolecule Entities
Molecule Chains Length Organism Details
CH1/Ckappa Fab heavy chain H 221 Homo sapiens Mutation: K151A, S187A, K217E
Gene Name(s): IGH@
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CH1/Ckappa Fab light chain L 212 Homo sapiens Mutation: E122K, S130R, S175I
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

H, L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

H, L 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
H L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.194
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 94.28 α = 90.00
b = 60.61 β = 100.59
c = 86.24 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-05-11
  • Released Date: 2017-08-02
  • Deposition author(s): Hendle, J.

Revision History

No revisions since initial release