5VRC

Crystal structure for Methylobacterium extorquens PqqC (truncation of natural CD fusion)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Crystal structures for Methylobacterium extorquens PqqC from the CD natural fusion and the C truncation

Evans III, R.L.Esler, M.A.Latham, J.A.Klinman, J.P.Wilmot, C.M.

Not Published 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Bifunctional coenzyme PQQ synthesis protein C/D
A, B, C, D
280Methylorubrum extorquens AM1Mutation(s): 0 
Gene Names: pqqCDMexAM1_META1p1749
EC: 1.3.3.11
UniProt
Find proteins for Q49150 (Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1))
Explore Q49150 
Go to UniProtKB:  Q49150
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ49150
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 62.501α = 90
b = 114.185β = 90
c = 145.403γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata scaling
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM66569 (C.M.W.)
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM-118117 (J.P.K.)

Revision History  (Full details and data files)

  • Version 1.0: 2018-05-16
    Type: Initial release
  • Version 1.1: 2019-05-29
    Changes: Data collection, Database references
  • Version 1.2: 2020-01-01
    Changes: Author supporting evidence
  • Version 1.3: 2023-10-04
    Changes: Data collection, Database references, Refinement description