5TLK

COMPLEX BETWEEN HUMAN CD27 AND FAB FRAGMENTS OF ANTIBODIES M2177 AND H2191


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 5TLK

Classification: IMMUNE SYSTEM

Total Structure Weight: 218153.03

Macromolecule Entities
Molecule Chains Length Organism Details
M2177 LIGHT CHAIN A, E 218 Homo sapiens Mus musculus
M2177 HEAVY CHAIN B, F 229 Homo sapiens Mus musculus
H2191 LIGHT CHAIN C, G 218 Homo sapiens Mus musculus
H2191 HEAVY CHAIN D, H 226 Homo sapiens Mus musculus
CD27 antigen X, Y 109 Homo sapiens Fragment: EXTRACELLULAR DOMAIN RESIDUES 21-121
Gene Name(s): CD27 Gene View TNFRSF7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

X, Y N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
B, D, F, H L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.213
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 139.71 α = 90.00
b = 52.96 β = 109.52
c = 140.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-10-11
  • Released Date: 2017-02-08
  • Deposition author(s): Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.

Revision History

  • Version 1_0: 2017-02-08

    Type: Initial release