Download MendeleyCrystal structure of Ruminiclostridium Thermocellum beta-Glucosidase A
Salama-Alber, O., Bayer, E.To be published.
5OGZ
Crystal structure of Ruminiclostridium Thermocellum beta-Glucosidase A
- PDB DOI: https://doi.org/10.2210/pdb5OGZ/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Acetivibrio thermocellus ATCC 27405
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): No
- Deposited: 2017-07-13 Released: 2018-08-01
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.216
- R-Value Work: 0.183
- R-Value Observed: 0.184
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-glucosidase A | 456 | Acetivibrio thermocellus ATCC 27405 | Mutation(s): 0 Gene Names: bglA, Cthe_0212 EC: 3.2.1.21 |  | |
UniProt | |||||
Find proteins for P26208 (Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)) Explore P26208 Go to UniProtKB: P26208 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P26208 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | C [auth A], D [auth B], E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| EDO Query on EDO | F [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.216
- R-Value Work: 0.183
- R-Value Observed: 0.184
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 91.67 | α = 90 |
| b = 56.22 | β = 100.2 |
| c = 94.5 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2018-08-01 Deposition Author(s): Salama-Alber, O., Bayer, E.
Revision History (Full details and data files)
- Version 1.0: 2018-08-01
Type: Initial release - Version 1.1: 2019-10-16
Changes: Data collection - Version 1.2: 2024-01-17
Changes: Advisory, Data collection, Database references, Refinement description
