5I4A

X-ray crystal structure of Marinitoga piezophila Argonaute in complex with 5' OH guide RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 5I4A

Classification: RNA BINDING PROTEIN / RNA

Total Structure Weight: 165458.31


Macromolecule Entities
Molecule Chains Length Organism Details
Argonaute protein A, C 642 Marinitoga piezophila Gene Name(s): Marpi_0405
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*U)-3') B, D 21 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.216
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 50.88 α = 110.87
b = 75.42 β = 90.55
c = 102.21 γ = 90.09

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-11
  • Released Date: 2016-03-30
  • Deposition author(s): Doxzen, K.W., Kaya, E., Knoll, K.R., Wilson, R.C., Strutt, S.C., Kranzusch, P.J., Doudna, J.A.

Revision History

  • 2016-04-13
    Type: Database references
  • 2016-06-15
    Type: Database references
  • 2016-07-06
    Type: Data collection