5I1K

CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV5-51/IGKV3-20


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 5I1K

Classification: IMMUNE SYSTEM

Total Structure Weight: 48974.39

Macromolecule Entities
Molecule Chains Length Organism Details
FAB LIGHT CHAIN L 215 Homo sapiens
FAB HEAVY CHAIN H 228 Homo sapiens

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NHE
Query on NHE

H 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
N-CYCLOHEXYLTAURINE; CHES (Synonym)
C8 H17 N O3 S
MKWKNSIESPFAQN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

H, L SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

H, L GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.197
  • R-Value Work: 0.172
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 63.76 α = 90.00
b = 74.09 β = 90.00
c = 102.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-05
  • Released Date: 2016-06-08
  • Deposition author(s): Teplyakov, A., Obmolova, G., Malia, T., Luo, J., Gilliland, G.

Revision History

  • 2016-06-29
    Type: Database references
  • 2016-08-03
    Type: Database references