5H48
Crystal structure of Cbln1
- PDB DOI: https://doi.org/10.2210/pdb5H48/pdb
- Classification: PROTEIN BINDING
- Organism(s): Rattus norvegicus
- Expression System: Homo sapiens
- Mutation(s): No 
- Deposited: 2016-10-31 Released: 2017-09-06 
- Funding Organization(s): the National Natural Science Foundation of China, the Ministry of Science and Technology of China
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.203 
- R-Value Work: 0.163 
- R-Value Observed: 0.165 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Cerebellin-1 | 184 | Rattus norvegicus | Mutation(s): 0  Gene Names: Cbln1 | ||
UniProt | |||||
Find proteins for P63182 (Rattus norvegicus) Explore P63182  Go to UniProtKB:  P63182 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63182 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 Å
- R-Value Free: 0.203 
- R-Value Work: 0.163 
- R-Value Observed: 0.165 
- Space Group: P 6
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 82.981 | α = 90 |
b = 82.981 | β = 90 |
c = 50.543 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2017-09-06  Deposition Author(s): Zhong, C., Shen, J., Zhang, H., Ding, J.
Funding Organization | Location | Grant Number |
---|---|---|
the National Natural Science Foundation of China | China | 31370726 |
the Ministry of Science and Technology of China | China | 2013CB910404 |
Revision History (Full details and data files)
- Version 1.0: 2017-09-06
Type: Initial release - Version 1.1: 2017-09-20
Changes: Database references - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Atomic model, Data collection, Derived calculations, Structure summary - Version 2.1: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary