5A3I

Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.244

Literature

Macromolecules
Sequence Display for 5A3I

Classification: VIRAL PROTEIN

Total Structure Weight: 210548.81

Macromolecule Entities
Molecule Chains Length Organism Details
HEMAGGLUTININ A, E 328 Influenza a virus Fragment: HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 17-340
Mutation: N154D, N220K, Q222L, T315I
Gene Name(s): HA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HEMAGGLUTININ B 166 Influenza a virus Fragment: HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN C, G 230 Homo sapiens
ANTI-HAEMAGGLUTININ HA1 FAB LIGHT CHAIN D, H 219 Homo sapiens
HEMAGGLUTININ F 166 Influenza a virus Fragment: HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512
Mutation: R68K
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, E N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.244
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 86.75 α = 78.67
b = 87.70 β = 84.66
c = 100.90 γ = 73.91

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-01
  • Released Date: 2015-07-22
  • Deposition author(s): Xiong, X., Corti, D., Liu, J., Pinna, D., Foglierini, M., Calder, L.J., Martin, S.R., Lin, Y.P., Walker, P.A., Collins, P.J., Monne, I., Suguitan Jr, A.L., Santos, C., Temperton, N.J., Subbarao, K., Lanzavecchia, A., Gamblin, S.J., Skehel, J.J.

Revision History

  • Version 1_0: 2015-07-22

    Type: Initial release

  • Version 1_1: 2015-08-12

    Type: Database references

  • Version 1_2: 2015-09-09

    Type: Source and taxonomy