4MJV

Influenza Neuraminidase in complex with a novel antiviral compound

Structural Biology Knowledgebase: 4MJV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4MJV

Classification: hydrolase / hydrolase inhibitor

Total Structure Weight: 43592.41

Macromolecule Entities
Molecule Chains Length Organism Details
Neuraminidase A 390 Influenza a virus EC#: 3.2.1.18 IUBMB
Mutation: A94V, T266A, G294N, T330AA
Gene Name(s): NA

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
27V
Query on 27V

A (2E,5S,9R,10S)-10-(acetylamino)-2-imino-4- oxo-9-(pentan-3-yloxy)-1-thia-3-azaspiro[4.5]dec- 6-ene-7-carboxylic acid
C16 H23 N3 O5 S
YPLGHUGDNRYXJS-WQGACYEGSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.200
  • Space Group: I 4

Unit Cell:

Length (Å) Angle (°)
a = 90.74 α = 90.00
b = 90.74 β = 90.00
c = 112.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-09-04
  • Released Date: 2014-01-15
  • Deposition author(s): Kerry, P.S.

Revision History

  • 2014-02-19
    Type: Citation | Details: Citation update