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PARVOVIRUS/DNA COMPLEX
DOI:10.2210/pdb4dpv/pdb   NDB ID: PDV006
4DPV
ENTRY 4DPV SUPERSEDES 3DPV
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Virus/dna  [ VIPERdb   ]
    Structure Weight: 68087.71
    Molecule: DNA (5'-D(*AP*TP*AP*CP*CP*TP*CP*TP*TP*GP*C)-3')
    Polymer: 1 Type: dna Length: 11
    Chains: N
    Molecule: PROTEIN (PARVOVIRUS COAT PROTEIN)
    Polymer: 2 Type: protein Length: 584
    Chains: Z
    Organism Canine parvovirus
    UniProtKB:   Protein Feature View | Search PDB | P17455  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Canine parvovirus   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1FPV  FELINE PANLEUKOPENIA VIRUS 
    2CAS  EMPTY CANINE PARVOVIRUS (NO DNA) 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PDV006
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
No info available for origin of biological assembly
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Chapman, M.S.,  Rossmann, M.G.

    Deposition:   1996-02-01
    Release:   1997-04-01
    Last Modified (REVDAT):   2009-02-24

    Previous versions:  2DPV 3DPV
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.90
    R-Value: n/a
    R-Free: 0.283
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 263.21 α = 90.00 
    b = 349.01 β = 90.82 
    c = 267.32 γ = 90.00