4YHI

Reversal Agent for Dabigatran


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 4YHI

Classification: IMMUNE SYSTEM

Total Structure Weight: 96665.85

Macromolecule Entities
Molecule Chains Length Organism Details
aDabi-Fab2a heavy chain A, H 222 Homo sapiens
aDabi-Fab2a light chain B, L 219 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4CC
Query on 4CC

A, H N-[(2-{[(4-carbamimidoylphenyl)amino]methyl}- 1-methyl-1H-benzimidazol-5-yl)carbonyl]-N- pyridin-2-yl-beta-alanine
C25 H25 N7 O3
YBSJFWOBGCMAKL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.181
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 51.81 α = 90.00
b = 128.92 β = 92.30
c = 60.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-02-27
  • Released Date: 2016-01-13
  • Deposition author(s): Schiele, F., Nar, H.

Revision History

  • Version 1_0: 2016-01-13

    Type: Initial release