4XVS

Crystal structure of HIV-1 donor 45 d45-01dG5 coreE gp120 with antibody 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 (VRC07_1995)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 4XVS

Classification: Viral protein / Immune system

Total Structure Weight: 91531.56

Macromolecule Entities
Molecule Chains Length Organism Details
VRC07_1995 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 Heavy chain H 228 Homo sapiens
45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 Light chain L 210 Homo sapiens
Donor 45 01dG5 coreE gp120 G 375 Human immunodeficiency virus 1 Gene Name(s): env
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

G N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.214
  • R-Value Work: 0.194
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 67.64 α = 90.00
b = 69.33 β = 90.00
c = 200.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-01-27
  • Released Date: 2015-05-06
  • Deposition author(s): Joyce, M.G., Mascola, J.R., Kwong, P.D.

Revision History

  • 2016-07-27
    Type: Data collection