4XNN

Crystal Structure of a GH7 Family Cellobiohydrolase from Daphnia pulex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.209 
  • R-Value Work: 0.164 
  • R-Value Observed: 0.166 

wwPDB Validation   3D Report Full Report


This is version 3.2 of the entry. See complete history


Literature

Characterization of a GH7 Family Cellobiohydrolase from Daphnia pulex

Hobdey, S.E.Ebrahim, A.Podkaminer, K.Taylor II, L.E.Beckham, G.T.Decker, S.R.Himmel, M.E.Cragg, S.M.McGeehan, J.E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cellobiohydrolase CHBI
A, B
445Daphnia pulexMutation(s): 0 
Gene Names: CEL7ADAPPUDRAFT_347598
EC: 3.2.1.91
UniProt
Find proteins for E9G5J5 (Daphnia pulex)
Explore E9G5J5 
Go to UniProtKB:  E9G5J5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupE9G5J5
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
PCA
Query on PCA
A, B
L-PEPTIDE LINKINGC5 H7 N O3GLN
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.209 
  • R-Value Work: 0.164 
  • R-Value Observed: 0.166 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 128.29α = 90
b = 47.02β = 108.23
c = 173.5γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/L001926/1
Department of Energy (DOE, United States)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2016-01-27
    Type: Initial release
  • Version 2.0: 2017-08-30
    Changes: Advisory, Atomic model, Author supporting evidence, Derived calculations
  • Version 3.0: 2020-03-11
    Changes: Polymer sequence
  • Version 3.1: 2022-03-30
    Changes: Author supporting evidence, Data collection, Database references, Refinement description, Source and taxonomy
  • Version 3.2: 2024-01-10
    Changes: Data collection, Refinement description