Download MendeleyStructure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol-(1,3,4,5)-tetrakisphosphate
Bruder, L.M., Mosimann, S.C.To be published.
4WTY
Structure of the PTP-like myo-inositol phosphatase from Selenomonas ruminantium in complex with myo-inositol-(1,3,4,5)-tetrakisphosphate
- PDB DOI: https://doi.org/10.2210/pdb4WTY/pdb
- Classification: HYDROLASE
- Organism(s): Selenomonas ruminantium
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2014-10-30 Released: 2015-11-04
- Funding Organization(s): Canadian Foundation for Innovation, Natural Sciences and Engineering Research Council (NSERC, Canada)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
- R-Value Observed: 0.157
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MYO-INOSITOL PHOSPHOHYDROLASE | 342 | Selenomonas ruminantium | Mutation(s): 1 Gene Names: phyA |  | |
UniProt | |||||
Find proteins for Q7WUJ1 (Selenomonas ruminantium) Explore Q7WUJ1 Go to UniProtKB: Q7WUJ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7WUJ1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 4IP Query on 4IP | C [auth A], H [auth B] | INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE C6 H16 O18 P4 CIPFCGZLFXVXBG-CNWJWELYSA-N |  | ||
| GOL Query on GOL | D [auth A] E [auth A] F [auth A] I [auth B] J [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| CL Query on CL | G [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
- R-Value Observed: 0.157
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 45.83 | α = 90 |
| b = 138.15 | β = 102.3 |
| c = 80.58 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| MOLREP | phasing |
| iMOSFLM | data reduction |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-11-04 Deposition Author(s): Bruder, L.M., Mosimann, S.C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Canadian Foundation for Innovation | Canada | -- |
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | -- |
Revision History (Full details and data files)
- Version 1.0: 2015-11-04
Type: Initial release - Version 1.1: 2017-09-13
Changes: Author supporting evidence, Derived calculations - Version 1.2: 2020-01-08
Changes: Author supporting evidence - Version 1.3: 2023-09-27
Changes: Data collection, Database references, Refinement description
