4W79

Crystal Structure of Human Protein N-terminal Glutamine Amidohydrolase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.144

Literature

Macromolecules
Sequence Display for 4W79

Classification: HYDROLASE

Total Structure Weight: 24636.53

Macromolecule Entities
Molecule Chains Length Organism Details
Protein N-terminal glutamine amidohydrolase A 202 Homo sapiens EC#: 3.5.1 IUBMB
Mutation: I32V, N93S, F116I, R134C
Gene Name(s): WDYHV1 Gene View C8orf32 NTAQ1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PG4
Query on PG4

A TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO3
Query on CO3

A CARBONATE ION
C O3
BVKZGUZCCUSVTD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.144
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 34.32 α = 90.00
b = 64.04 β = 90.00
c = 113.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-21
  • Released Date: 2014-09-17
  • Deposition author(s): Bitto, E., Bingman, C.A., McCoy, J.G., Wesenberg, G.E., Phillips Jr., G.N., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • 2014-12-10
    Type: Database references
  • 2017-09-06
    Type: Author supporting evidence, Derived calculations, Other, Source and taxonomy, Structure summary