4UV7

The complex structure of extracellular domain of EGFR and GC1118A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 4UV7

Classification: TRANSFERASE

Total Structure Weight: 118591.47

Macromolecule Entities
Molecule Chains Length Organism Details
EPIDERMAL GROWTH FACTOR RECEPTOR A 621 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: EXTRACELLULAR DOMAIN, UNP RESIDUES 25-645
Gene Name(s): EGFR Gene View ERBB ERBB1 HER1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
GC1118A H 225 Homo sapiens
GC1118A L 219 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BMA
Query on BMA

A BETA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-RWOPYEJCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.202
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 78.39 α = 90.00
b = 84.17 β = 97.11
c = 97.79 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-05
  • Released Date: 2015-10-14
  • Deposition author(s): Yoo, J.H., Cho, H.S.

Revision History

  • Version 1_0: 2015-10-14

    Type: Initial release

  • Version 1_1: 2015-10-21

    Type: Structure summary

  • Version 1_2: 2015-12-02

    Type: Database references

  • Version 1_3: 2016-03-02

    Type: Database references