4UUU

1.7 A resolution structure of human cystathionine beta-synthase regulatory domain (del 516-525) in complex with SAM

Structural Biology Knowledgebase: 4UUU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.159

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4UUU

Classification: LYASE

Total Structure Weight: 36436.29

Macromolecule Entities
Molecule Chains Length Organism Details
CYSTATHIONINE BETA-SYNTHASE A, B 155 Homo sapiens EC#: 4.2.1.22 IUBMB
Fragment: REGULATORY DOMAIN, RESIDUES 406-547
Details: (DELETION RESIDUES 515-526)
Gene Name(s): CBS Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAM
Query on SAM

A, B S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.199
  • R-Value Work: 0.159
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.85 α = 90.00
b = 78.65 β = 90.00
c = 90.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-07-31
  • Released Date: 2014-08-13
  • Deposition author(s): Kopec, J., McCorvie, T.J., Fitzpatrick, F., Strain-Damerell, C., Froese, D.S., Tallant, C., Burgess-Brown, N., Arrowsmith, C., Edwards, A., Bountra, C., Yue, W.W.

Revision History

  • 2015-01-14
    Type: Citation | Details: JRNL
  • 2014-11-05
    Type: Citation | Details: JRNL
  • 2014-09-17
    Type: Entry title | Details: TITLE
  • 2014-08-20
    Type: Entry title | Details: TITLE