4RI4

Crystal structure of PTPN3 (PTPH1) Y676I mutant in complex with vanadate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.163

Literature

Macromolecules
Sequence Display for 4RI4

Classification: HYDROLASE

Total Structure Weight: 70025.31

Macromolecule Entities
Molecule Chains Length Organism Details
Tyrosine-protein phosphatase non-receptor type 3 A, B 306 Homo sapiens EC#: 3.1.3.48 IUBMB
Fragment: Catalytic domain (UNP RESIDUES 628-909)
Mutation: Y676I
Gene Name(s): PTPN3 Gene View PTPH1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
VO4
Query on VO4

A, B VANADATE ION
O4 V
LSGOVYNHVSXFFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.163
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 94.88 α = 90.00
b = 99.41 β = 90.00
c = 134.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-10-05
  • Released Date: 2015-03-11
  • Deposition author(s): Chen, K.-E., Meng, T.C., Wang, A.H.-J.

Revision History

  • Version 1_0: 2015-03-11

    Type: Initial release