4R8F

Crystal structure of yeast aminopeptidase 1 (Ape1)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 4R8F

Classification: HYDROLASE

Total Structure Weight: 207546.06

Macromolecule Entities
Molecule Chains Length Organism Details
Vacuolar aminopeptidase 1 A, B, C, D 470 Saccharomyces cerevisiae EC#: 3.4.11.22 IUBMB
Gene Name(s): APE1 API LAP4 YSC1 YKL103C YKL455
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.215
  • Space Group: H 3
  • Diffraction Data DOI:
  • 10.15785/SBGRID/87 SBGrid

Unit Cell:

Length (Å) Angle (°)
a = 140.17 α = 90.00
b = 140.17 β = 90.00
c = 348.68 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-09-02
  • Released Date: 2015-08-12
  • Deposition author(s): Su, M.-Y., Chang, C.-I.

Revision History

  • Version 1_0: 2015-08-12

    Type: Initial release

  • Version 1_1: 2017-11-22

    Type: Refinement description