4PTU

Crystal Structure of anti-23F strep Fab C05 with rhamnose


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 4PTU

Classification: IMMUNE SYSTEM

Total Structure Weight: 48545.02

Macromolecule Entities
Molecule Chains Length Organism Details
Antibody pn132p2C05, light chain A 217 Homo sapiens
Antibody pn132p2C05, heavy chain B 235 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RAM
Query on RAM

B ALPHA-L-RHAMNOSE
C6 H12 O5
SHZGCJCMOBCMKK-HGVZOGFYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.179
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 132.15 α = 90.00
b = 48.74 β = 120.20
c = 79.31 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-03-11
  • Released Date: 2015-03-04
  • Deposition author(s): Bryson, S., Risnes, L., Damgupta, S., Thomson, C.A., Smith, K., Schrader, J.W., Pai, E.F.

Revision History

  • Version 1_0: 2015-03-04

    Type: Initial release